Publications

scDesign2: a transparent simulator that generates high-fidelity single-cell gene expression count data with gene correlations captured | Jessica Li

PseudotimeDE: inference of differential gene expression along cell pseudotime with valid p-values from single-cell RNA sequencing data | Jessica Li

Automated identification of clinical features from sparsely annotated 3-dimensional medical imaging | Eran Halperin

Automated identification of clinical features from sparsely annotated 3-dimensional medical imaging | Eran Halperin

Pre-existing conditions in Hispanics/Latinxs that are COVID-19 risk factors | Bogdan Pasaniuc

ConsHMM Atlas: conservation state annotations for major genomes and human genetic variation | Jason Ernst

Identification and characterization of constrained non-exonic bases lacking predictive epigenomic and transcription factor binding annotations | Jason Ernst

Learning a genome-wide score of human-mouse conservation at the functional genomics level | Jason Ernst

Efficient variance components analysis across millions of genomes | Bogdan Pasaniuc & Sriram Sankararaman

A Statistical Model for Quantifying the Needed Duration of Social Distancing for the COVID-19 Pandemic | Sriram Sankararaman & Eran Halperin

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